Stem-loop sequence mdo-mir-7398a-2

AccessionMI0024027 (change log)
DescriptionMonodelphis domestica miR-7398a-2 stem-loop
Gene family MIPF0001643; mir-7398
Stem-loop
   --    u             a     u uu 
5'   ugug agaggcgagaaau ugcug g  g
     |||| ||||||||||||| ||||| |   
3'   acac uuuccgcucuuua auggu c  u
   ua    -             a     u ua 
Get sequence
Deep sequencing
1282 reads, 0 reads per million, 5 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (MonDom5; GCF_000002295.2) Overlapping transcripts
chrX: 57291703-57291761 [+]
intergenic
Clustered miRNAs
< 10kb from mdo-mir-7398a-2
mdo-mir-7398a-1chrX: 57282764-57282822 [+]
mdo-mir-7398rchrX: 57283471-57283531 [+]
mdo-mir-7398nchrX: 57284128-57284188 [+]
mdo-mir-7398k-1chrX: 57284809-57284869 [+]
mdo-mir-7398k-2chrX: 57285473-57285533 [+]
mdo-mir-7398ochrX: 57286131-57286191 [+]
mdo-mir-7398lchrX: 57286820-57286880 [+]
mdo-mir-7398mchrX: 57287463-57287521 [+]
mdo-mir-7398cchrX: 57288057-57288117 [+]
mdo-mir-7398bchrX: 57288723-57288783 [+]
mdo-mir-7398vchrX: 57289402-57289462 [+]
mdo-mir-7398a-2chrX: 57291703-57291761 [+]
mdo-mir-7398a-4chrX: 57292644-57292702 [+]
mdo-mir-7398a-3chrX: 57293442-57293500 [+]
mdo-mir-7398a-5chrX: 57293921-57293979 [+]
mdo-mir-7398wchrX: 57294562-57294624 [+]
mdo-mir-7398pchrX: 57296466-57296526 [+]
mdo-mir-7398qchrX: 57297040-57297098 [+]
mdo-mir-7398dchrX: 57297721-57297779 [+]
mdo-mir-7398schrX: 57298336-57298390 [+]
mdo-mir-7398uchrX: 57301459-57301516 [+]
Database links

Mature sequence mdo-miR-7398a-5p

Accession MIMAT0028900
Sequence

1 - 

uguguagaggcgagaaauaugcu

 - 23

Get sequence
Deep sequencing1044 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

Mature sequence mdo-miR-7398a-3p

Accession MIMAT0028901
Sequence

38 - 

uaaauuucucgccuuucacaau

 - 59

Get sequence
Deep sequencing3800 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).