Stem-loop sequence mdo-mir-7385f

AccessionMI0024004 (change log)
DescriptionMonodelphis domestica miR-7385f stem-loop
Gene family MIPF0001688; mir-7385
Stem-loop
   --           u    cu      u cucuu g 
5'   aggucugauag cuau  uuucag g     g a
     ||||||||||| ||||  |||||| |     |  
3'   ucuagacuauc gaua  aagguc c     c a
   gg           u    -u      - ----- a 
Get sequence
Deep sequencing
64419 reads, 1.24e+03 reads per million, 5 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (MonDom5; GCF_000002295.2) Overlapping transcripts
chrX: 4616510-4616572 [+]
intergenic
Clustered miRNAs
< 10kb from mdo-mir-7385f
mdo-mir-7385achrX: 4607962-4608023 [+]
mdo-mir-7385i-2chrX: 4609054-4609115 [+]
mdo-mir-7385bchrX: 4610588-4610649 [+]
mdo-mir-7385cchrX: 4611475-4611536 [+]
mdo-mir-7385dchrX: 4611934-4611995 [+]
mdo-mir-7385g-1chrX: 4612215-4612274 [+]
mdo-mir-7385echrX: 4614575-4614633 [+]
mdo-mir-7385g-2chrX: 4614848-4614911 [+]
mdo-mir-7385hchrX: 4615421-4615479 [+]
mdo-mir-7385fchrX: 4616510-4616572 [+]
mdo-mir-7385i-1chrX: 4616788-4616846 [+]
mdo-mir-7385g-3chrX: 4617777-4617836 [+]
Database links

Mature sequence mdo-miR-7385f-5p

Accession MIMAT0028878
Sequence

1 - 

aggucugauagucuaucuuuuca

 - 23

Get sequence
Deep sequencing324 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

Mature sequence mdo-miR-7385f-3p

Accession MIMAT0028879
Sequence

42 - 

gaauauagucuaucagaucugg

 - 63

Get sequence
Deep sequencing64095 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).