Stem-loop sequence mdo-mir-7386j

AccessionMI0023987 (change log)
DescriptionMonodelphis domestica miR-7386j stem-loop
Gene family MIPF0001658; mir-7386
Stem-loop
   -   u             u      u aa 
5'  cca ggauaggguguuu auuuug g  c
    ||| ||||||||||||| |||||| |  a
3'  ggu cuuauuccacaaa uaaaac c  u
   g   u             -      - ga 
Get sequence
Deep sequencing
247 reads, 0 reads per million, 4 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MonDom5; GCF_000002295.2) Overlapping transcripts
chrX: 40482901-40482958 [+]
intergenic
Clustered miRNAs
< 10kb from mdo-mir-7386j
mdo-mir-7387chrX: 40473856-40473914 [+]
mdo-mir-7371ochrX: 40474430-40474488 [+]
mdo-mir-7371nchrX: 40476156-40476213 [+]
mdo-mir-7386hchrX: 40478033-40478091 [+]
mdo-mir-7386cchrX: 40478197-40478256 [+]
mdo-mir-7371qchrX: 40479473-40479531 [+]
mdo-mir-7386ichrX: 40481296-40481352 [+]
mdo-mir-7371mchrX: 40481839-40481897 [+]
mdo-mir-7386jchrX: 40482901-40482958 [+]
mdo-mir-7386kchrX: 40484389-40484445 [+]
mdo-mir-7386dchrX: 40485434-40485494 [+]
mdo-mir-7386echrX: 40485588-40485646 [+]
mdo-mir-7371kchrX: 40486320-40486378 [+]
mdo-mir-7386qchrX: 40488023-40488080 [+]
mdo-mir-7386lchrX: 40488792-40488846 [+]
mdo-mir-7371lchrX: 40489392-40489450 [+]
mdo-mir-7386fchrX: 40491868-40491926 [+]
mdo-mir-7386gchrX: 40492022-40492080 [+]
Database links

Mature sequence mdo-miR-7386j-5p

Accession MIMAT0028846
Sequence

1 - 

ccauggauaggguguuuuauuuu

 - 23

Get sequence
Deep sequencing14 reads, 2 experiments
Evidence experimental; Illumina [1]
Predicted targets

Mature sequence mdo-miR-7386j-3p

Accession MIMAT0028847
Sequence

38 - 

aauaaacaccuuauucuuggg

 - 58

Get sequence
Deep sequencing232 reads, 4 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).