Stem-loop sequence bma-mir-5844

Accession MI0023440
Description Brugia malayi miR-5844 stem-loop
Stem-loop 
ggaacuuccccug    uc  gcuu     u     a        -   cg  ug       --u  a 
             ucuu  uu    uuugu auugu guugcuau aga  aa  cguuaca   ga a
             ||||  ||    ||||| ||||| |||||||| |||  ||  |||||||   ||  
             agag  aa    aaaca uagca caacgaua uuu  uu  gcaaugu   cu g
------------a    gc  aucu     -     c        g   au  ca       uau  g
Get sequence
Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Mature sequence bma-miR-5844

Accession MIMAT0026342
Sequence

76 -  

uaacgacuuuauuugauagcaacca

 - 100

Get sequence
Evidence not experimental

References

1
PMID:22216965 "Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel" Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C BMC Genomics. 13:4(2012).