Stem-loop sequence bta-mir-2285o-5

AccessionMI0022307 (change log)
DescriptionBos taurus miR-2285o-5 stem-loop
Gene family MIPF0000747; mir-2284
Literature search

11 open access papers mention bta-mir-2285o-5
(15 sentences)

Stem-loop
   a   u       -     c  a  g     uu   guca 
5'  uug guugguc aaaag uc uu ggguu  ucc    c
    ||| ||||||| ||||| || || |||||  |||     
3'  aac caaccgg uuuuc ag aa cccaa  agg    a
   -   c       g     a  c  g     --   acau 
Get sequence
Deep sequencing
3463 reads, 10.9 reads per million, 64 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr5: 118691013-118691088 [-]
intergenic
Clustered miRNAs
< 10kb from bta-mir-2285o-5
bta-mir-2284hchr5: 118691017-118691083 [+]
bta-mir-2285o-5chr5: 118691013-118691088 [-]
Database links

Mature sequence bta-miR-2285o

Accession MIMAT0025530
Sequence

47 - 

aaacccgaacgaacuuuugg

 - 66

Get sequence
Deep sequencing17940 reads, 65 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).