Stem-loop sequence bta-mir-376e

Accession MI0022290
Description Bos taurus miR-376e stem-loop
Gene family MIPF0000091; mir-368
Stem-loop 
u      c    g      a     u         - a ga 
 gauauu aaaa guggau uuccu cuauguuua c g  u
 |||||| |||| |||||| ||||| ||||||||| | |   
 cuauga uuuu caccua aagga gauacaaau g c  u
u      a    a      a     -         c a ag
Get sequence
Genome context
Coordinates (UMD3.1) Overlapping transcripts
chr21: 67577941-67578022 [+]
sense
Clustered miRNAs
< 10kb from bta-mir-376e
bta-mir-494 chr21: 67569676-67569760 [+]
bta-mir-1193 chr21: 67570008-67570112 [+]
bta-mir-543 chr21: 67571825-67571904 [+]
bta-mir-495 chr21: 67573235-67573315 [+]
bta-mir-154c chr21: 67575252-67575326 [+]
bta-mir-376e chr21: 67577941-67578022 [+]
bta-mir-376c chr21: 67578312-67578397 [+]
bta-mir-376d chr21: 67578686-67578767 [+]
bta-mir-654 chr21: 67578839-67578919 [+]
bta-mir-376b chr21: 67579062-67579154 [+]
bta-mir-376a chr21: 67579421-67579519 [+]
bta-mir-1185 chr21: 67581370-67581455 [+]
bta-mir-3956 chr21: 67582109-67582206 [+]
bta-mir-381 chr21: 67583073-67583147 [+]
bta-mir-487b chr21: 67583558-67583641 [+]
bta-mir-539 chr21: 67584372-67584449 [+]
bta-mir-544a chr21: 67586358-67586448 [+]
bta-mir-655 chr21: 67587315-67587411 [+]

Mature sequence bta-miR-376e

Accession MIMAT0025543
Sequence

51 -  

aacauagaggaaaauccacauu

 - 72

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).