Stem-loop sequence sma-mir-2d

Accession MI0021823
Description Schistosoma mansoni miR-2d stem-loop
Gene family MIPF0000049; mir-2
Stem-loop 
   cc         u   ----u          u   -cgaa    a 
cga  aguucguca ccu     ggauugugau uuc     auaa a
|||  ||||||||| |||     |||||||||| |||     ||||  
gcu  uuaagcagu gga     ccugacacua aag     uauu u
   --         -   uucgu          u   auaag    u
Get sequence
Genome context
Coordinates (WTSI5) Overlapping transcripts
Chr_5: 1982526-1982613 [-]
intergenic
Clustered miRNAs
< 10kb from sma-mir-2d
sma-mir-71b Chr_5: 1982759-1982850 [-]
sma-mir-2d Chr_5: 1982526-1982613 [-]
sma-mir-2c Chr_5: 1982423-1982497 [-]

Mature sequence sma-miR-2d-3p

Accession MIMAT0025035
Sequence

58 -  

uaucacaguccugcuuagguga

 - 79

Get sequence
Evidence not experimental

References

1
PMID:21640815 "Genome-wide identification of novel microRNAs and their target genes in the human parasite Schistosoma mansoni" de Souza Gomes M, Muniyappa MK, Carvalho SG, Guerra-Sa R, Spillane C Genomics. 98:96-111(2011).