Stem-loop sequence hsa-mir-6126

Accession

MI0021260 (change log)

Symbol

HGNC:MIR6126

Description

Homo sapiens miR-6126 stem-loop

Literature search

2 open access papers mention hsa-mir-6126
(2 sentences)

Stem-loop

   agccugugggaaagagaagagca          aa  ccc         
5'                        gggcagggug  gg   ggcggaga 
                          ||||||||||  ||   ||||||| c
3'                        uccgucccac  cc   ccgucuca 
   --------ucgacacaccgggua          ac  cac         

Deep sequencing

572 reads, 68.5 reads per million, 54 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr16: 3485381-3485469 [-]
• Overlapping transcripts:

  antisense

  OTTHUMT00000437842 ; LA16c-306E5.2-001; intron 2

  ENST00000575785 ; NAA60-001; intron 2

Database links

• HGNC:MIR6126
• miRBase Tracker:MI0021260

Mature sequence hsa-miR-6126

• Accession: MIMAT0024599
• Sequence: 31 - gugaaggcccggcggaga - 48
• Deep sequencing: 549 reads, 47 experiments
• Evidence: experimental; microarray [1]
• Predicted targets:
  • TargetScanVert:hsa-miR-6126
  • miRDB:hsa-miR-6126

References

1. PMID:22345437 "Induction of the cellular microRNA, Hs_154, by West Nile virus contributes to virus-mediated apoptosis through repression of antiapoptotic factors" Smith JL, Grey FE, Uhrlaub JL, Nikolich-Zugich J, Hirsch AJ J Virol. 86:5278-5287(2012).