Stem-loop sequence bta-mir-1260b

AccessionMI0021113 (change log)
DescriptionBos taurus miR-1260b stem-loop
Gene family MIPF0001381; mir-1260b
Literature search

3 open access papers mention bta-mir-1260b
(3 sentences)

Stem-loop
   -----   g      cu -gc    g   -      - u  c   ac   --u  u 
5'      guu cugcug  c   cauc auc ccacca c gc acc  ugc   gc a
        ||| ||||||  |   |||| ||| |||||| | || |||  |||   ||  
3'      cgg ggcggc  g   guag uag gguggu g cg ugg  acg   cg c
   ggucg   g      cu aua    -   u      c u  -   --   ccu  u 
Get sequence
Deep sequencing
4792 reads, 23.2 reads per million, 69 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr15: 14284962-14285061 [-]
intergenic
Database links

Mature sequence bta-miR-1260b

Accession MIMAT0024568
Sequence

21 - 

aucccaccacugccacca

 - 38

Get sequence
Deep sequencing4792 reads, 69 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:22298343 "Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells" Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA J Cell Biochem. 113:2098-2111(2012).