Stem-loop sequence bta-mir-1246

AccessionMI0021112 (change log)
DescriptionBos taurus miR-1246 stem-loop
Literature search

8 open access papers mention bta-mir-1246
(18 sentences)

Stem-loop
   caa    u    u gauu    gagc        gga 
5'    caua uaaa g    uuug    aggaaguu   a
      |||| |||| |    ||||    ||||||||    
3'    gugu auuu c    aaac    ucuuucgg   u
   gac    c    - --au    agac        aga 
Get sequence
Deep sequencing
3921 reads, 401 reads per million, 73 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr1: 117271718-117271790 [+]
intergenic
Database links

Mature sequence bta-miR-1246

Accession MIMAT0024567
Sequence

11 - 

aauggauuuuuggagcagg

 - 29

Get sequence
Deep sequencing3858 reads, 73 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:22298343 "Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells" Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA J Cell Biochem. 113:2098-2111(2012).