Stem-loop sequence ggo-mir-200a

Accession MI0020848
Description Gorilla gorilla miR-200a stem-loop
Gene family MIPF0000019; mir-8
Stem-loop 
gggaccccacgucccucc    - c   g        -            -----------     a 
                  cggg c ccu ugagcauc uuaccggacagu           gcugg u
                  |||| | ||| |||||||| ||||||||||||           ||||| u
                  gccc g gga acuuguag aauggucuguca           cgacc u
-------------ucgcc    a u   a        c            caaucucaguu     c
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Genome context
Coordinates (GorGor3) Overlapping transcripts
1: 1034061-1034171 [+]
intergenic
Clustered miRNAs
< 10kb from ggo-mir-200a
ggo-mir-200b 1: 1033307-1033417 [+]
ggo-mir-200a 1: 1034061-1034171 [+]
ggo-mir-429 1: 1035133-1035243 [+]

Mature sequence ggo-miR-200a

Accession MIMAT0024300
Sequence

71 -  

uaacacugucugguaacgaugu

 - 92

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Evidence experimental; Solexa [1]

References

1
PMID:22453055 "Annotation of primate miRNAs by high throughput sequencing of small RNA libraries" Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J BMC Genomics. 13:116(2012).