Stem-loop sequence ggo-mir-146a

Accession

MI0020682 (change log)

Description

Gorilla gorilla miR-146a stem-loop

Gene family

MIPF0000103; mir-146

Stem-loop

   ----------c     -----u      u     uu            c        g  uc 
5'            cgaug      guaucc cagcu  gagaacugaauu cauggguu ug  a
              |||||      |||||| |||||  |||||||||||| |||||||| ||  g
3'            gcuac      uauagg gucga  uucuugacuuaa guguccag ac  u
   ggaguucgcgu     ugucuc      -     -c            a        -  ug 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GorGor4; GCA_000151905.3): chr5: 144321556-144321664 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0020682

Mature sequence ggo-miR-146a

• Accession: MIMAT0024135
• Sequence: 21 - ugagaacugaauuccaugggu - 41
• Evidence: experimental; Illumina [1]

References

1. PMID:22453055 "Annotation of primate miRNAs by high throughput sequencing of small RNA libraries" Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J BMC Genomics. 13:116(2012).