Stem-loop sequence hsa-mir-6084

Accession MI0020361
Description Homo sapiens miR-6084 stem-loop
Stem-loop 
-a     - a    g      ag   cg    c    ccuc  a   u   gcuc  g 
  gcguc c ggcu ggccgc  gac  ggcg ggag    gc ggg cgg    gg c
  ||||| | |||| ||||||  |||  |||| ||||    || ||| |||    ||  
  cgcgg g ucgg ccggug  cug  ccgc cuuc    cg cuc gcc    cc u
gg     c g    g      -g   -a    -    --uu  c   u   -aau  c
Get sequence
Deep sequencing
6 reads, 5 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr1: 20960172-20960281 [+]
sense
OTTHUMT00000007954 ; PINK1-001; 3'UTR (exon 1)
OTTHUMT00000007954 ; PINK1-001; 3'UTR (exon 1)
ENST00000321556 ; PINK1-001; 3'UTR (exon 1)
ENST00000321556 ; PINK1-001; 3'UTR (exon 1)

Mature sequence hsa-miR-6084

Accession MIMAT0023709
Sequence

78 -  

uuccgccagucgguggccgg

 - 97

Get sequence
Evidence experimental; SOLiD [1]

References

1
PMID:22282338 "Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs" Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F RNA. 18:472-484(2012).