Stem-loop sequence bna-MIR6035

Accession

MI0020302 (change log)

Description

Brassica napus miR6035 stem-loop

Literature search

2 open access papers mention bna-MIR6035
(2 sentences)

Stem-loop

   aaacugca         a       c              ugcauuuu 
5'         aaauggagu gaaaaug agucgugaacaaac        c
           ||||||||| ||||||| ||||||||||||||        c
3'         uuuaccuca cuuuuac ucaguauuuguuug        a
   --------         c       a              uuuaccuc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (BrassicaDB-20080411): EM:AC189440: 135610-135700 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0020302

Mature sequence bna-miR6035

• Accession: MIMAT0023655
• Sequence: 12 - uggaguagaaaaugcagucgu - 32
• Evidence: experimental; Illumina [1]

References

1. PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes" Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ Plant Physiol. 158:813-823(2012).