Stem-loop sequence bna-MIR6033

Accession

MI0020300 (change log)

Description

Brassica napus miR6033 stem-loop

Stem-loop

   gaggau                 g  g      u        -a   cuc        
5'       ucucucaagucccacuc gu ugguuc uaggaacg  acc   uaacugu 
         ||||||||||||||||| || |||||| ||||||||  |||   |||||| u
3'       agagaguucagggugag ua accaag auccuugc  ugg   auugaca 
   -ugggu                 a  g      u        ag   ---        

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (BrassicaDB-20080411)	Overlapping transcripts
EM:AC137927: 57666-57775 [+]	intergenic
EM:AC172878: 21272-21381 [+]	intergenic

Database links

• miRBase Tracker:MI0020300

Mature sequence bna-miR6033

• Accession: MIMAT0023653
• Sequence: 78 - ugaaccagauagagugggacu - 98
• Evidence: experimental; Illumina [1]

References

1. PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes" Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ Plant Physiol. 158:813-823(2012).