Stem-loop sequence bna-MIR6030

Accession

MI0020297 (change log)

Description

Brassica napus miR6030 stem-loop

Literature search

1 open access papers mention bna-MIR6030
(1 sentences)

Stem-loop

   uca         u         -      cu   u   ca  a        uuuac 
5'    gggauuaag gucuguaug uguggg  gag agg  ca ucacagcu     u
      ||||||||| ||||||||| ||||||  ||| |||  || ||||||||     c
3'    uccuaauuc cagacauac auaccc  cuc ucc  gu aguguugg     a
   -ag         c         c      ac   u   ag  a        ucuag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (BrassicaDB-20080411): EM:AC189357: 62324-62436 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0020297

Mature sequence bna-miR6030

• Accession: MIMAT0023650
• Sequence: 82 - uccacccauaccauacagaccc - 103
• Evidence: experimental; Illumina [1]

References

1. PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes" Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ Plant Physiol. 158:813-823(2012).