Stem-loop sequence bna-MIR399c

AccessionMI0020290 (change log)
DescriptionBrassica napus miR399c stem-loop
Gene family MIPF0000015; MIR399
Literature search

5 open access papers mention bna-MIR399c
(11 sentences)

Stem-loop 
        a     a               ga u -      uucagucuu      g 
5' auuac gggca gaucuccuuuggcag  a c cauuac         acauau c
   ||||| ||||| |||||||||||||||  | | ||||||         ||||||  
3' uaaug ccugu uuagaggaaaccguc  u g guggug         uguaua a
        g     -               uc c a      -------uu      u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (BrassicaDB-20080411) Overlapping transcripts
EM:BH538972: 179-281 [+]
intergenic
Database links

Mature sequence bna-miR399c

Accession MIMAT0023643
Sequence

79 -  

ugccaaaggagauuuguccgg

 - 99

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Evidence experimental; Illumina [1]

References

1
PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes" Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ Plant Physiol. 158:813-823(2012).