Stem-loop sequence bna-MIR156e

Accession

MI0020261 (change log)

Description

Brassica napus miR156e stem-loop

Gene family

MIPF0000008; MIR156

Stem-loop

   gaaaugcaaca     -------           -     -       u    ag   cu     gu 
5'            gagaa       aacugacagaa gagag ugagcac ugca  gca  guuau  g
              |||||       ||||||||||| ||||| ||||||| ||||  |||  |||||   
3'            cucuu       uugacugucuu cucuc acucgug gugu  cgu  caaua  u
   -------uucg     caguccg           u     c       c    -g   uu     ac 

Confidence

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Genome context

Coordinates (BrassicaDB-20080411)	Overlapping transcripts
EM:AC189375: 124714-124832 [+]	intergenic
EM:DU831758: 290-408 [-]	intergenic

Database links

• miRBase Tracker:MI0020261

Mature sequence bna-miR156e

• Accession: MIMAT0023614
• Sequence: 20 - ugacagaagagagugagcac - 39
• Evidence: experimental; Illumina [1]

References

1. PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes" Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ Plant Physiol. 158:813-823(2012).