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miRBase |
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Stem-loop sequence osa-MIR5794 |
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Accession | MI0019806 (change log) | ||
Description | Oryza sativa miR5794 stem-loop | ||
Literature search |
3 open access papers mention osa-MIR5794 | ||
Stem-loop |
c g caa u c c u - u a uacuguuggcauacacacaaccauagaguucaucuucagaaccaaauccacguucuugaaaauaugaggagggugcugcuggaagaacaacaaucgcucaucgugauggcugcccaccauggugaccguagaaacuagcaua 5' cau gauau gcug gacuguu g gauucc ca gaaaucca aauauggaaa caa aggcuugaaguaga g ||| ||||| |||| ||||||| | |||||| || |||||||| |||||||||| ||| |||||||||||||| a 3' gua cuaua cgac cugauga c cuaagg gu cuuuaggu uuauaucuuu guu uucgaacuucaucu a c g uug u a a c c u a cguucaggacccaaaguagccacucggaaacaaagacagauaguaccgacggugguuucacugguaucuuugauuuuaucuuuuccaucaaugaacagauaggguugcauuuacuuguuucagugaacucuauagaugaaaa |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Database links |
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Mature sequence osa-miR5794 |
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Accession | MIMAT0023261 |
Sequence |
401 - ugaggaaucacuaguagucgu - 421 |
Deep sequencing | 9379 reads, 2 experiments |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"
Plant Cell. 23:4185-4207(2011).
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