Stem-loop sequence gma-MIR169r

AccessionMI0019762 (change log)
DescriptionGlycine max miR169r stem-loop
Gene family MIPF0001058; MIR169_6
Literature search

23 open access papers mention gma-MIR169r
(101 sentences)

Stem-loop
   a        u      a        u         -      aaa   aaaa 
5'  gaguagau ugagcc ggauggcu gccggcaua ugcuua   gca    g
    |||||||| |||||| |||||||| ||||||||| ||||||   |||    a
3'  cuuguuua acucgg ccuaccgg uggucguau augggu   cgu    u
   c        u      a        -         u      --g   cccc 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Glycine_max_v2.0; GCA_000004515.3) Overlapping transcripts
chr17: 4587059-4587161 [-]
intergenic
Clustered miRNAs
< 10kb from gma-MIR169r
gma-MIR169schr17: 4594138-4594257 [-]
gma-MIR169gchr17: 4591798-4591927 [-]
gma-MIR169rchr17: 4587059-4587161 [-]
Database links

Mature sequence gma-miR169r

Accession MIMAT0023217
Sequence

11 - 

ugagccaggauggcuugccggc

 - 32

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs" Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC Genes Dev. 25:2540-2553(2011).