Stem-loop sequence sha-mir-383

Accession MI0019658
Description Sarcophilus harrisii miR-383 stem-loop
Gene family MIPF0000137; mir-383
Stem-loop 
---------------------------acagcagaagcuccaaa u   c     -c  a      aa      u      uu gg ag 
                                            g cac ugcuc  uc gaucag  ggugau guggcu  g  c  a
                                            | ||| |||||  || ||||||  |||||| ||||||  |  |  c
                                            c gug acgag  ag cugguc  ucacua caccga  c  g  a
aggucgaccaacguuuggguuccagggcacuccggguuccgauc u   a     aa  a      gg      -      -- aa gu
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Genome context
Coordinates (DEVIL7_0) Overlapping transcripts
GL864737.1: 2362136-2362285 [+]
sense

Mature sequence sha-miR-383

Accession MIMAT0022829
Sequence

31 -  

cagaucagaaggugauuguggc

 - 52

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Evidence experimental; Solexa [1]

References

1
PMID:20044575 "The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer" Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT Science. 327:84-87(2010).