Stem-loop sequence sha-mir-125a

Accession MI0019629
Description Sarcophilus harrisii miR-125a stem-loop
Gene family MIPF0000017; mir-125
Stem-loop 
------------------------------agaaaggaaugucuguugcgccc   u  -a    u    c           au     c 
                                                     cuc ca  uccc gaga ccuaacuugug  guuua c
                                                     ||| ||  |||| |||| |||||||||||  ||||| g
                                                     gag gu  aggg uucu ggauugggcac  uaaau u
uuuguuugucuuuuuuuuuucaaggugguuuauagggucuacguuuccguguu   u  cg    -    c           -c     u
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Genome context
Coordinates (DEVIL7_0) Overlapping transcripts
GL849656.1: 1066094-1066243 [+]
intergenic

Mature sequence sha-miR-125a

Accession MIMAT0022802
Sequence

31 -  

ucccugagacccuaacuuguga

 - 52

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Evidence experimental; Solexa [1]

References

1
PMID:20044575 "The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer" Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT Science. 327:84-87(2010).