Stem-loop sequence sha-mir-204

Accession MI0019617
Description Sarcophilus harrisii miR-204 stem-loop
Gene family MIPF0000042; mir-204
Stem-loop 
gggaaaggagcuucugaccauauaaccauggcuaccgucucucuccaugu   ucg     u          a     u    gagaau 
                                                  gac   uggac ucccuuuguc uccua gccu      a
                                                  |||   ||||| |||||||||| ||||| ||||      u
                                                  cug   acuug agggaaacgg agggu cggg      a
------------------------------aguuuucucuacgguuacua   uug     c          a     -    ggaagu
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Genome context
Coordinates (DEVIL7_0) Overlapping transcripts
GL841514.1: 388049-388198 [+]
intergenic

Mature sequence sha-miR-204

Accession MIMAT0022790
Sequence

101 -  

gcugggaaggcaaagggacgu

 - 121

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Evidence experimental; Solexa [1]

References

1
PMID:20044575 "The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer" Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT Science. 327:84-87(2010).