Stem-loop sequence ola-mir-145

AccessionMI0019562 (change log)
DescriptionOryzias latipes miR-145 stem-loop
Gene family MIPF0000079; mir-145
Literature search

1 open access papers mention ola-mir-145
(2 sentences)

Stem-loop
   guc    u  c             gggcu 
5'    cagu uu ccaggaaucccuu     g
      |||| || |||||||||||||     u
3'    guca aa gguccuuagggga     c
   -ua    u  a             aaaaa 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
ultracontig115: 5320131-5320190 [+]
sense
ENSORLT00000025943 ; ola-mir-145-201; exon 1
Clustered miRNAs
< 10kb from ola-mir-145
ola-mir-143ultracontig115: 5319909-5320017 [+]
ola-mir-145ultracontig115: 5320131-5320190 [+]
Database links

Mature sequence ola-miR-145

Accession MIMAT0022669
Sequence

2 - 

uccaguuuucccaggaau

 - 19

Get sequence
Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).