Stem-loop sequence ola-mir-181a-2

AccessionMI0019560 (change log)
DescriptionOryzias latipes miR-181a-2 stem-loop
Gene family MIPF0000007; mir-181
Literature search

2 open access papers mention ola-mir-181a-2
(107 sentences)

Stem-loop
   ucaa  a           ug      a    g gac 
5'     gg acauucaacgc  ucggug guuu u   a
       || |||||||||||  |||||| |||| |    
3'     cc ugugaguugcg  agcuac caaa a   a
   -agc  a           --      -    g gga 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
ultracontig105: 3834-3903 [+]
sense
ENSORLT00000025983 ; ola-mir-181a-2-201; exon 1
Database links

Mature sequence ola-miR-181a-5p

Accession MIMAT0022586
Sequence

7 - 

aacauucaacgcugucggu

 - 25

Get sequence
Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).