Stem-loop sequence ola-mir-182

Accession MI0019549
Description Oryzias latipes miR-182 stem-loop
Gene family MIPF0000116; mir-182
Stem-loop 
u    ---     u  ug   u       u -g      uca      ugaggu 
 uugg   uucuc ag  gug uuggcaa g  uagaac   cacugg      a
 ||||   ||||| ||  ||| ||||||| |  ||||||   ||||||       
 aacc   gagag uc  cau aaccguu c  aucuug   guggcc      g
-    ugu     u  gu   c       - ag      ---      uaggua
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
23: 14604891-14604991 [+]
intergenic
Clustered miRNAs
< 10kb from ola-mir-182
ola-mir-183-2 23: 14604483-14604573 [+]
ola-mir-182 23: 14604891-14604991 [+]

Mature sequence ola-miR-182

Accession MIMAT0022658
Sequence

19 -  

uuuggcaaugguagaacucacac

 - 41

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Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).