Stem-loop sequence ola-mir-9b-2

AccessionMI0019522 (change log)
DescriptionOryzias latipes miR-9b-2 stem-loop
Gene family MIPF0000014; mir-9
Literature search

4 open access papers mention ola-mir-9b-2
(13 sentences)

Stem-loop
   a   gaccg   -           uc       a       g      uu 
5'  agg     cgg guuaguuugug  uuugguu ucuagcu uaugag  u
    |||     ||| |||||||||||  ||||||| ||||||| ||||||  u
3'  uuc     gcc cagucaagcau  aagccaa agaucga auacuu  a
   -   -acga   g           ga       g       a      ua 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
17: 23411155-23411254 [-]
intergenic
Database links

Mature sequence ola-miR-9b-5p

Accession MIMAT0022546
Sequence

24 - 

ucuuugguuaucuagcuguauga

 - 46

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Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).