Stem-loop sequence ola-mir-99

Accession MI0019505
Description Oryzias latipes miR-99 stem-loop
Gene family MIPF0000025; mir-99
Stem-loop 
u   a   ug     -      c a         uc   u      gaaaa 
 ggu uuu  gccau uuggca a acccguaga  cga cuugug     u
 ||| |||  ||||| |||||| | |||||||||  ||| ||||||     c
 cca aag  uggug gacugu u ugggugucu  gcu gaacac     u
g   c   ug     u      c c         cc   c      ggcag
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
14: 1151199-1151302 [-]
intergenic
Clustered miRNAs
< 10kb from ola-mir-99
ola-mir-99 14: 1151199-1151302 [-]
ola-let-7c 14: 1150882-1150977 [-]
ola-mir-125b-2 14: 1144184-1144291 [-]

Mature sequence ola-miR-99

Accession MIMAT0022629
Sequence

61 -  

caagcucgccucugugggucuc

 - 82

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Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).