Stem-loop sequence ola-mir-125b-2

Accession MI0019503
Description Oryzias latipes miR-125b-2 stem-loop
Gene family MIPF0000017; mir-125
Stem-loop 
guagacuc   c ua    a     -    u    c            gcucucu 
        ugu g  cuuc ccugc uccc gaga ccuaacuuguga       u
        ||| |  |||| ||||| |||| |||| ||||||||||||       g
        aca c  gagg gggcg aggg uucu ggauugggcacu       a
--cagcua   - gg    c     c    -    c            aaaaaau
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
14: 1144184-1144291 [-]
sense
Clustered miRNAs
< 10kb from ola-mir-125b-2
ola-mir-99 14: 1151199-1151302 [-]
ola-let-7c 14: 1150882-1150977 [-]
ola-mir-125b-2 14: 1144184-1144291 [-]

Mature sequence ola-miR-125b

Accession MIMAT0022627
Sequence

26 -  

ucccugagacccuaacuuguga

 - 47

Get sequence
Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).