Stem-loop sequence ola-mir-132

Accession MI0019495
Description Oryzias latipes miR-132 stem-loop
Gene family MIPF0000065; mir-132
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled Mir-132. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

In molecular biology miR-132 microRNA is a short non-coding RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms, generally reducing protein levels through the cleavage of mRNAs or the repression of their translation. Several targets for miR-132 have been described, including mediators of neurological development, synaptic transmission, inflammation and angiogenesis.

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Stem-loop
-uuccac       a   ua        au            -  --a  a 
       ugucucc ugg  accguggc  uagauuguuacu gu   gc a
       ||||||| |||  ||||||||  |||||||||||| ||   ||  
       acggggg auc  ugguaccg  aucugacaaugg ca   cg c
acagaaa       -   gc        ac            u  cca  a 
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
13: 10157836-10157934 [-]
intergenic

Mature sequence ola-miR-132

Accession MIMAT0022617
Sequence

61 - 

uaacagucuacagccaugg

 - 79

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Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).