Stem-loop sequence ola-mir-139

Accession MI0019494
Description Oryzias latipes miR-139 stem-loop
Gene family MIPF0000117; mir-139
Stem-loop 
uauuau  -     c   -      -   u  a  u          u  ua 
      gg ccugg ugu auucua cag gc ug gucuccagua gu  g
      || ||||| ||| |||||| ||| || || |||||||||| ||  u
      cc ggacc aca uaaggu guc cg gc cagaggucau cg  g
-gcaac  a     a   a      u   u  -  u          -  ua
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
13: 21690229-21690327 [+]
intergenic

Mature sequence ola-miR-139

Accession MIMAT0022616
Sequence

20 -  

ucuacagugcaugugucucca

 - 40

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Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).