Stem-loop sequence ola-mir-122

AccessionMI0019484 (change log)
DescriptionOryzias latipes miR-122 stem-loop
Gene family MIPF0000095; mir-122
Literature search

1 open access papers mention ola-mir-122
(12 sentences)

Stem-loop
   --------  -agcaa  c    ccuccag      gg       c           uuucc 
5'         gc      ac uugu       agcugu  aguguga aaugguguuug     u
           ||      || ||||       ||||||  ||||||| |||||||||||      
3'         cg      ug gaca       ucgaua  ucacacu uuaccgcaaac     g
   uuugacuc  aaaaag  u    -------      aa       a           uaucc 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (MEDAKA1) Overlapping transcripts
12: 9243561-9243670 [+]
intergenic
Database links

Mature sequence ola-miR-122

Accession MIMAT0022604
Sequence

63 - 

aacgccauuaucacacuaa

 - 81

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Evidence experimental; SOLiD [1]

References

1
PMID:21143817 "Discovery and characterization of medaka miRNA genes by next generation sequencing platform" Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC BMC Genomics. 11 Suppl 4:S8(2010).