Stem-loop sequence hsa-mir-5691

Accession

MI0019296

Description

Homo sapiens miR-5691 stem-loop

Stem-loop

     ag uu         u     aa     a 
ggaca  c  gcucugagc ccgag  agcug c
|||||  |  ||||||||| |||||  ||||| a
ccugu  g  cgagacuug gguuc  ucgac g
     cu uu         u     -g     a 

Deep sequencing

1 reads, 1 experiments

Genome context

• Coordinates (GRCh37.p5): chr11: 9111859-9111926 [-]
• Overlapping transcripts:

  sense

  OTTHUMT00000385812 ; SCUBE2-005; intron 1

  OTTHUMT00000376180 ; SCUBE2-003; intron 1

  OTTHUMT00000376181 ; SCUBE2-001; intron 1

  OTTHUMT00000385812 ; SCUBE2-005; intron 1

  OTTHUMT00000376180 ; SCUBE2-003; intron 1

  OTTHUMT00000376181 ; SCUBE2-001; intron 1

  OTTHUMT00000385812 ; SCUBE2-005; intron 1

  OTTHUMT00000376180 ; SCUBE2-003; intron 1

  OTTHUMT00000376181 ; SCUBE2-001; intron 1

  OTTHUMT00000385818 ; SCUBE2-014; intron 2

  OTTHUMT00000385818 ; SCUBE2-014; intron 2

  OTTHUMT00000385818 ; SCUBE2-014; intron 2

  ENST00000309263 ; SCUBE2-005; intron 1

  ENST00000450649 ; SCUBE2-003; intron 1

  ENST00000520467 ; SCUBE2-001; intron 1

  ENST00000457346 ; SCUBE2-201; intron 1

  ENST00000309263 ; SCUBE2-005; intron 1

  ENST00000450649 ; SCUBE2-003; intron 1

  ENST00000520467 ; SCUBE2-001; intron 1

  ENST00000457346 ; SCUBE2-201; intron 1

  ENST00000309263 ; SCUBE2-005; intron 1

  ENST00000450649 ; SCUBE2-003; intron 1

  ENST00000520467 ; SCUBE2-001; intron 1

  ENST00000457346 ; SCUBE2-201; intron 1

  ENST00000534295 ; SCUBE2-014; intron 2

  ENST00000534295 ; SCUBE2-014; intron 2

  ENST00000534295 ; SCUBE2-014; intron 2

Mature sequence hsa-miR-5691

• Accession: MIMAT0022483
• Sequence: 9 - uugcucugagcuccgagaaagc - 30
• Evidence: experimental; Solexa [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5691
  • MIRDB:hsa-miR-5691
  • TARGETMINER:hsa-miR-5691

References

1. PMID:21980368 "MicroRNAs associated with metastatic prostate cancer" Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y PLoS One. 6:e24950(2011).