Stem-loop sequence hsa-mir-548aw

Accession MI0019283
Description Homo sapiens miR-548aw stem-loop
Gene family MIPF0000317; mir-548
Stem-loop 
     c               a       ua 
uaggu ggugcaaaagucauc cgguuuu  c
||||| ||||||||||||||| |||||||  c
aucca cuacguuuucaguag gccaaaa  a
     a               c       uu
Get sequence
Deep sequencing
22 reads, 11 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr9: 135821094-135821158 [+]
sense
OTTHUMT00000393840 ; GFI1B-003; intron 1
OTTHUMT00000393840 ; GFI1B-003; intron 1
OTTHUMT00000393840 ; GFI1B-003; intron 1
ENST00000339463 ; GFI1B-003; intron 1
ENST00000372124 ; GFI1B-201; intron 1
ENST00000339463 ; GFI1B-003; intron 1
ENST00000372124 ; GFI1B-201; intron 1
ENST00000339463 ; GFI1B-003; intron 1
ENST00000372124 ; GFI1B-201; intron 1

Mature sequence hsa-miR-548aw

Accession MIMAT0022471
Sequence

8 -  

gugcaaaagucaucacgguu

 - 27

Get sequence
Deep sequencing 3 reads, 3 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:21980368 "MicroRNAs associated with metastatic prostate cancer" Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y PLoS One. 6:e24950(2011).