Stem-loop sequence gma-MIR5667

Accession MI0019261
Description Glycine max miR5667 stem-loop
Stem-loop 
g ug    a            c            ---c   a  a 
 u  gaac gaggaauccauu agaucuguuucg    aac cc u
 |  |||| |||||||||||| ||||||||||||    ||| || a
 a  cuug uuccuuagguaa ucuagacaaagu    uug gg u
- gu    a            a            cagc   -  u
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Genome context
Coordinates (Phytozome5.0) Overlapping transcripts
Gm07: 5340343-5340430 [-]
intergenic

Mature sequence gma-miR5667

Accession MIMAT0022449
Sequence

58 -  

aaacagaucuaaauggauucc

 - 78

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Evidence experimental; RT-PCR [1], Solexa [1-2]

References

1
PMID:21219599 "Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing" Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS BMC Plant Biol. 11:5(2011).
2
PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs" Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC Genes Dev. 25:2540-2553(2011).