Stem-loop sequence ath-MIR5636

Accession MI0019208
Description Arabidopsis thaliana miR5636 stem-loop
Stem-loop 
     gu   u  a          gcgc    guuu  uc 
agauc  agu gc gagcuugacg    ucau    ac  u
|||||  ||| || ||||||||||    ||||    ||  u
uuugg  ucg cg uucggacugc    agua    ug  u
     au   c  a          ----    -aau  uu
Get sequence
Deep sequencing
2 reads, 2 experiments
Genome context
Coordinates (TAIR10) Overlapping transcripts
chr1: 18549959-18550036 [+]
intergenic

Mature sequence ath-miR5636

Accession MIMAT0022396
Sequence

5 -  

cguaguugcagagcuugacgg

 - 25

Get sequence
Deep sequencing 2 reads, 2 experiments
Evidence experimental; Solexa [1]

References

1
PMID:21940835 "High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis" Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN Genome Res. 22:163-176(2012).