Stem-loop sequence cin-mir-5610

Accession MI0019176
Description Ciona intestinalis miR-5610 stem-loop
Stem-loop 
--       a      u      cuaauu       
  aauaauu gcauca cagucu      uauaua 
  ||||||| |||||| ||||||      ||||| u
  uuauuga uguagu gucaga      auauaa 
ag       g      u      cacgac
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Genome context
Coordinates (JGI2) Overlapping transcripts
9p: 27347-27415 [+]
sense
ENSCINT00000011099 ; F7ABY6_CIOIN; intron 1

Mature sequence cin-miR-5610-5p

Accession MIMAT0022347
Previous IDs cin-miR-5610*
Sequence

1 -  

aauaauuagcaucaucagucu

 - 21

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Evidence not experimental

Mature sequence cin-miR-5610-3p

Accession MIMAT0022348
Previous IDs cin-miR-5610
Sequence

49 -  

acuguugaugugaguuauuga

 - 69

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Evidence not experimental

References

1
PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).