Stem-loop sequence hsa-mir-1295b

Accession

MI0019146

Description

Homo sapiens miR-1295b stem-loop

Stem-loop

-ca          c      a   c   c 
   cccagaucug ggccua uca agg c
   |||||||||| |||||| ||| ||| a
   gggucuaggc ccggau agu uuu c
aac          a      a   c   a 

Genome context

• Coordinates (GRCh37.p5): chr1: 171070880-171070939 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000086221 ; FMO3-003; intron 1

  OTTHUMT00000086221 ; FMO3-003; intron 1

  OTTHUMT00000086221 ; FMO3-003; intron 1

  OTTHUMT00000086219 ; FMO3-001; intron 2

  OTTHUMT00000086222 ; FMO3-004; intron 2

  OTTHUMT00000086219 ; FMO3-001; intron 2

  OTTHUMT00000086222 ; FMO3-004; intron 2

  OTTHUMT00000086219 ; FMO3-001; intron 2

  OTTHUMT00000086222 ; FMO3-004; intron 2

  OTTHUMT00000086220 ; FMO3-002; intron 3

  OTTHUMT00000086220 ; FMO3-002; intron 3

  OTTHUMT00000086220 ; FMO3-002; intron 3

  ENST00000478457 ; FMO3-003; intron 1

  ENST00000478457 ; FMO3-003; intron 1

  ENST00000478457 ; FMO3-003; intron 1

  ENST00000367755 ; FMO3-001; intron 2

  ENST00000479749 ; FMO3-004; intron 2

  ENST00000392085 ; FMO3-201; intron 2

  ENST00000538429 ; FMO3-202; intron 2

  ENST00000367755 ; FMO3-001; intron 2

  ENST00000479749 ; FMO3-004; intron 2

  ENST00000392085 ; FMO3-201; intron 2

  ENST00000538429 ; FMO3-202; intron 2

  ENST00000367755 ; FMO3-001; intron 2

  ENST00000479749 ; FMO3-004; intron 2

  ENST00000392085 ; FMO3-201; intron 2

  ENST00000538429 ; FMO3-202; intron 2

  ENST00000472784 ; FMO3-002; intron 3

  ENST00000542847 ; FMO3-203; intron 3

  ENST00000472784 ; FMO3-002; intron 3

  ENST00000542847 ; FMO3-203; intron 3

  ENST00000472784 ; FMO3-002; intron 3

  ENST00000542847 ; FMO3-203; intron 3

  antisense

  ENST00000408463 ; MIR1295-201; exon 1

  ENST00000408463 ; MIR1295A-201; exon 1

  ENST00000408463 ; MIR1295A-201; exon 1

Clustered miRNAs

< 10kb from hsa-mir-1295b

• hsa-mir-1295a: chr1: 171070869-171070947 [-]
• hsa-mir-1295b: chr1: 171070880-171070939 [+]

Mature sequence hsa-miR-1295b-5p

• Accession: MIMAT0022293
• Sequence: 1 - cacccagaucugcggccuaau - 21
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1295b-5p
  • MIRDB:hsa-miR-1295b-5p
  • TARGETMINER:hsa-miR-1295b-5p

Mature sequence hsa-miR-1295b-3p

• Accession: MIMAT0022294
• Sequence: 39 - aauaggccacggaucugggcaa - 60
• Evidence: not experimental
• Predicted targets:
  • DIANA-MICROT:hsa-miR-1295b-3p
  • MIRDB:hsa-miR-1295b-3p
  • TARGETMINER:hsa-miR-1295b-3p

References

1. PMID:21911355 "miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades" Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N Nucleic Acids Res. 40:37-52(2012).