Stem-loop sequence hsa-mir-5572

Accession MI0019117
Description Homo sapiens miR-5572 stem-loop
Stem-loop 
-----agc   -    ----     uc    gg   cacu    a  cag     gcacu         -a      u  g 
        cag acaa    gaggg  augg  agu    guca cc   agcag     gccccugcg  ccagcc gg g
        ||| ||||    |||||  ||||  |||    |||| ||   |||||     |||||||||  |||||| ||  
        guc uguu    uucuc  uacc  ucg    uagu gg   ucguc     uggggacgu  gguugg cu c
cgauguua   c    ucgu     --    uu   ----    -  ---     -----         gg      -  a
Get sequence
Deep sequencing
6 reads, 4 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr15: 80873444-80873580 [+]
sense
OTTHUMT00000384440 ; ARNT2-009; intron 4
OTTHUMT00000384440 ; ARNT2-009; intron 4
OTTHUMT00000384440 ; ARNT2-009; intron 4
OTTHUMT00000384389 ; ARNT2-001; intron 16
OTTHUMT00000384390 ; ARNT2-004; intron 16
OTTHUMT00000384389 ; ARNT2-001; intron 16
OTTHUMT00000384390 ; ARNT2-004; intron 16
OTTHUMT00000384389 ; ARNT2-001; intron 16
OTTHUMT00000384390 ; ARNT2-004; intron 16
OTTHUMT00000384436 ; ARNT2-006; intron 17
OTTHUMT00000384436 ; ARNT2-006; intron 17
OTTHUMT00000384436 ; ARNT2-006; intron 17
ENST00000525505 ; ARNT2-009; intron 4
ENST00000525505 ; ARNT2-009; intron 4
ENST00000525505 ; ARNT2-009; intron 4
ENST00000303329 ; ARNT2-001; intron 16
ENST00000527771 ; ARNT2-004; intron 16
ENST00000360062 ; ARNT2-201; intron 16
ENST00000303329 ; ARNT2-001; intron 16
ENST00000527771 ; ARNT2-004; intron 16
ENST00000360062 ; ARNT2-201; intron 16
ENST00000303329 ; ARNT2-001; intron 16
ENST00000527771 ; ARNT2-004; intron 16
ENST00000533983 ; ARNT2-006; intron 17
ENST00000540859 ; ARNT2-202; intron 17
ENST00000533983 ; ARNT2-006; intron 17
ENST00000540859 ; ARNT2-202; intron 17
ENST00000533983 ; ARNT2-006; intron 17

Mature sequence hsa-miR-5572

Accession MIMAT0022260
Sequence

77 -  

guuggggugcaggggucugcu

 - 97

Get sequence
Evidence experimental; SOLiD [1]
Predicted targets

References

1
PMID:21895886 "Deep sequencing of short RNAs reveals novel microRNAs in minor salivary glands of patients with Sjogren's syndrome" Tandon M, Gallo A, Jang SI, Illei GG, Alevizos I Oral Dis. 18:127-131(2012).