Stem-loop sequence hsa-mir-5571

Accession

MI0019115

Description

Homo sapiens miR-5571 stem-loop

Stem-loop

aucu   a aa     --gaacca           a          c    aa   ac 
    gac c  aaugu        agcaauucuca aggagccucc agga  uuc  u
    ||| |  |||||        ||||||||||| |||||||||| ||||  |||   
    cug g  uuaca        ucguugagagu uccucggagg uccu  agg  u
---c   a ag     aaacaaaa           c          a    ga   au 

Deep sequencing

5 reads, 3 experiments

Genome context

• Coordinates (GRCh37.p5): chr22: 23228447-23228559 [+]
• Overlapping transcripts:

  antisense

  ENST00000448061 ; D87024.2-201; intron 1

  ENST00000418352 ; D87024.2-202; intron 1

  ENST00000440387 ; D87024.2-203; intron 1

Mature sequence hsa-miR-5571-5p

• Accession: MIMAT0022257
• Sequence: 25 - caauucucaaaggagccuccc - 45
• Deep sequencing: 3 reads, 2 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5571-5p
  • MIRDB:hsa-miR-5571-5p
  • TARGETMINER:hsa-miR-5571-5p

Mature sequence hsa-miR-5571-3p

• Accession: MIMAT0022258
• Sequence: 65 - guccuaggaggcuccucug - 83
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • DIANA-MICROT:hsa-miR-5571-3p
  • MIRDB:hsa-miR-5571-3p
  • TARGETMINER:hsa-miR-5571-3p

References

1. PMID:21895886 "Deep sequencing of short RNAs reveals novel microRNAs in minor salivary glands of patients with Sjogren's syndrome" Tandon M, Gallo A, Jang SI, Illei GG, Alevizos I Oral Dis. 18:127-131(2012).