Stem-loop sequence sbi-MIR5565e

Accession MI0019098
Description Sorghum bicolor miR5565e stem-loop
Gene family MIPF0001279; MIR5565
Stem-loop 
------------------------------------------------------uaaacggua                 u  c      a c             u    a  ag   a           a 
                                                               agguuuuguuuggaugu gu ggauuc c ucaauccacaugu uugg gu  auu ggguggaauuu g
                                                               ||||||||||||||||| || |||||| | ||||||||||||| |||| ||  ||| ||||||||||| u
                                                               uccggaacaaaccuaca ca ccuaag g aguuagguguaca aacc ca  uaa cucaccuugaa u
cuaggaaaagguaggaguauagauagagaagauauaaauagaugugauaggugugaauauaaa                 u  a      c u             u    c  cu   c           c
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Genome context
Coordinates (Sorbi1) Overlapping transcripts
chr_9: 6107961-6108173 [+]
intergenic

Mature sequence sbi-miR5565e

Accession MIMAT0022243
Sequence

15 -  

uuguuuggauguugucgga

 - 33

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Evidence experimental; 454 [1]

References

1
PMID:21907786 "Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum" Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R Genomics. 98:460-468(2011).