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miRBase |
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Stem-loop sequence mtr-MIR168c |
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Accession | MI0019093 (change log) | |||||
Description | Medicago truncatula miR168c stem-loop | |||||
Gene family | MIPF0000081; MIR168 | |||||
Literature search |
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5 open access papers mention mtr-MIR168c | |||||
Stem-loop |
----c uu ua c u a cua u u 5' ucac cgcggucuc auucg uuggugcagg cggga cca ca ccgcug uuucg |||| ||||||||| ||||| |||||||||| ||||| ||| || |||||| |||| u 3' agug gcgccggag uaagu aacuacguuc gcccu ggu gu ggcggc aaaga aucua -- gc c c a uaa - c |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence mtr-miR168c-5p |
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Accession | MIMAT0022235 |
Previous IDs | mtr-miR168c |
Sequence |
21 - ucgcuuggugcaggucgggaa - 41 |
Evidence | experimental; Illumina [1-2] |
Mature sequence mtr-miR168c-3p |
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Accession | MIMAT0022236 |
Previous IDs | mtr-miR168c* |
Sequence |
86 - cccgccuugcaucaacugaau - 106 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:21762498
"Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing"
BMC Genomics. 12:367(2011).
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2 |
PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"
Genes Dev. 25:2540-2553(2011).
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