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miRBase |
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Stem-loop sequence cel-mir-5549 |
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Accession | MI0019070 (change log) | |||||
Description | Caenorhabditis elegans miR-5549 stem-loop | |||||
Stem-loop |
ac g gg uuuuu -uugu guuuuc a 5' ga aggg agagau ugggcc gaaauuaacguga ugguc u || |||| |||||| |||||| ||||||||||||| ||||| 3' uu uuuc uuuuug auuugg uuuugguuguacu aucag c -u g ua -uuuu uuguu -----a u |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence cel-miR-5549-5p |
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Accession | MIMAT0022189 |
Sequence |
28 - cuugugaaauuaacgugagu - 47 |
Deep sequencing | 1 reads, 1 experiments |
Evidence | experimental; Illumina [1] |
Mature sequence cel-miR-5549-3p |
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Accession | MIMAT0022190 |
Sequence |
67 - ucauguugguuuuuuguuggu - 87 |
Deep sequencing | 4586 reads, 15 experiments |
Evidence | experimental; Illumina [1] |
Database links |
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References |
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1 |
PMID:21810936
"Age-associated changes in expression of small, noncoding RNAs, including microRNAs, in C. elegans"
RNA. 17:1804-1820(2011).
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