Stem-loop sequence osa-MIR5517

Accession MI0019036
Description Oryza sativa miR5517 stem-loop
Stem-loop 
caaaucaauu     ca         -   a aaccc    ca   g      
          ugcau  cggcgcaua ugu g     cguu  guu acuac 
          |||||  ||||||||| ||| |     ||||  ||| |||| a
          augua  gccgugugu gcg c     gcaa  cga ugaua 
accgacaugc     ac         u   a -guaa    ac   a
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Genome context
Coordinates (MSU7) Overlapping transcripts
Chr6: 24618621-24618723 [-]
intergenic

Mature sequence osa-miR5517

Accession MIMAT0022151
Sequence

11 -  

ugcaucacggcgcauauguag

 - 31

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Evidence experimental; Solexa [1]

References

1
PMID:21679406 "Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa" Wei LQ, Yan LF, Wang T Genome Biol. 12:R53(2011).