Stem-loop sequence pti-MIR5478

Accession MI0018996
Description Phaeodactylum tricornutum miR5478 stem-loop
Stem-loop 
agaaagag     -    ca       a    acaguacggcgcgaaacgguaccgauccggcgugccgacuggauuaggaagaauagguagguagguauacggacugugacugua 
        uccga acga  gauuucu uugu                                                                                    g
        ||||| ||||  ||||||| ||||                                                                                     
        gggcu ugcu  cuaagga aaca                                                                                    a
uaaaggag     a    ag       -    gcuuauuccaugggucaagccagccaaccgcuuaugccaucuuugcaacacaucgugagugcuagacccuuaucuacgaacgua
Get sequence

Mature sequence pti-miR5478

Accession MIMAT0022111
Sequence

201 -  

gacaaaggaaucgaucguaucg

 - 222

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:21718527 "Identification and characterization of microRNAs from Phaeodactylum tricornutum by high-throughput sequencing and bioinformatics analysis" Huang A, He L, Wang G BMC Genomics. 12:337(2011).