Stem-loop sequence aca-mir-5408a

Accession MI0018911
Description Anolis carolinensis miR-5408a stem-loop
Gene family MIPF0001313; mir-5408
Stem-loop 
  a     u     c  u      uaaug        uagc 
ag ggguu ggacu ua cuccca     cuuagccg    u
|| ||||| ||||| || ||||||     ||||||||     
uc cccaa cuuga gu gagggu     gaaucggu    c
  c     c     a  u      cuuca        gagc
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Genome context
Coordinates (AnoCar2.0) Overlapping transcripts
GL343282.1: 1472516-1472599 [-]
intergenic
Clustered miRNAs
< 10kb from aca-mir-5408a
aca-mir-5407 GL343282.1: 1475305-1475385 [-]
aca-mir-5406 GL343282.1: 1474906-1474981 [-]
aca-mir-5408a GL343282.1: 1472516-1472599 [-]
aca-mir-5452 GL343282.1: 1468391-1468478 [+]

Mature sequence aca-miR-5408a-5p

Accession MIMAT0022024
Previous IDs aca-miR-5408a
Sequence

15 -  

cuaucucccauaaugcuuagc

 - 35

Get sequence
Evidence experimental; Solexa [1]

Mature sequence aca-miR-5408a-3p

Accession MIMAT0022025
Previous IDs aca-miR-5408a*
Sequence

52 -  

uaagacuucugggaguugaag

 - 72

Get sequence
Evidence experimental; Solexa [1]

References

1
PMID:21775315 "MicroRNAs support a turtle + lizard clade" Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ Biol Lett. 8:104-107(2012).