Stem-loop sequence asu-mir-2b

Accession

MI0018530 (change log)

Description

Ascaris suum miR-2b stem-loop

Literature search

1 open access papers mention asu-mir-2b
(6 sentences)

Stem-loop

   ----  acu      u   u     uu a     u  u   g 
5'     ga   cuggcg gcu aaucg  c gugau ca agu a
       ||   |||||| ||| |||||  | ||||| || ||| a
3'     cu   gaucgc cgg uuagc  g cacua gu ucg u
   guca  -gu      c   u     uu a     u  -   a 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0018530

Mature sequence asu-miR-2b-5p

• Accession: MIMAT0021427
• Previous IDs: asu-miR-2b*
• Sequence: 12 - ugcuuaaucguucagugauuca - 33
• Evidence: experimental; Illumina [1]

Mature sequence asu-miR-2b-3p

• Accession: MIMAT0021428
• Previous IDs: asu-miR-2b
• Sequence: 48 - uaucacaguucgauuuggcccg - 69
• Evidence: experimental; Illumina [1]

References

1. PMID:21685128 "Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles" Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE Genome Res. 21:1462-1477(2011).