Stem-loop sequence rmi-mir-5336

Accession MI0018518
Description Rhipicephalus microplus miR-5336 stem-loop
Stem-loop 
------------------------------------uca  ucuuu     --    cg  --   gu u      g a   c  aa 
                                       cg     gaucu  cauu  gc  gcg  u ccucga a gca ag  a
                                       ||     |||||  ||||  ||  |||  | |||||| | ||| ||   
                                       gc     cuggg  guag  ug  cgc  a ggaguu u cgu uc  g
acguggugucgccaccggcgugugguacgacaaauacgg  ---uu     ac    au  aa   ug -      g c   -  aa
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Mature sequence rmi-miR-5336

Accession MIMAT0021409
Sequence

8 -  

uuugaucucauucggcgcgguuuccuc

 - 34

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Evidence experimental; Solexa [1]

References

1
PMID:21699734 "Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus" Barrero RA, Keeble-Gagnere G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M BMC Genomics. 12:328(2011).