Stem-loop sequence mtr-MIR5283

Accession

MI0018430 (change log)

Description

Medicago truncatula miR5283 stem-loop

Literature search

1 open access papers mention mtr-MIR5283
(1 sentences)

Stem-loop

   guaucc    gua   gg       -  aa      a  u     uu    uuu 
5'       gugc   ucg  auguauc gg  aguauc ga uauua  uuuu   a
         ||||   |||  ||||||| ||  |||||| || |||||  ||||    
3'       uaug   ggc  uacauag cc  ucauag uu auaau  aaaa   a
   ------    aag   ua       g  cc      g  u     uu    uaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 40353897-40353999 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0018430

Mature sequence mtr-miR5283

• Accession: MIMAT0021327
• Sequence: 6 - cgugcguaucgggauguaucggaa - 29
• Evidence: experimental; Illumina [1]

References

1. PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).