Stem-loop sequence mtr-MIR5250

Accession MI0018351
Description Medicago truncatula miR5250 stem-loop
Stem-loop 
uc   -    a  c   uc            g         u      u    u  uu 
  uug aagc gg ucu  aucuaacauucu gaacacuuu aaucuc aaau gu  a
  ||| |||| || |||  |||||||||||| ||||||||| |||||| |||| ||  a
  aac uucg cc agg  uagauuguaaga uuuguggaa uuggag uuua cg  a
uu   a    a  a   ca            g         u      -    -  uu
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Genome context
Coordinates (Mt3.0) Overlapping transcripts
MtChr5: 28961519-28961634 [-]
intergenic

Mature sequence mtr-miR5250

Accession MIMAT0021246
Sequence

84 -  

ugagaauguuagauacggaac

 - 104

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Evidence experimental; Solexa [1-2]

References

1
PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).
2
PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs" Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC Genes Dev. 25:2540-2553(2011).